Publications

Clara Morral, Jelena Stanisavljevic, Xavier Hernando-Momblona, Elisabetta Mereu, Adrian Alvarez-Varela, Carme Cortina, Diana Stork, Felipe Slebe, Gemma Turon, Gavin Whissell, Marta Sevillano, Anna Merlos-Suárez, Àngela Casanova-Martí, Catia Moutinho, Scott W. Lowe, Lukas E. Dow, Alberto Villanueva, Elena Sancho, Holger Heyn, Eduard Batlle (2020). Zonation of Ribosomal DNA Transcription Defines a Stem Cell Hierarchy in Colorectal Cancer. Zonation of Ribosomal DNA Transcription Defines a Stem Cell Hierarchy in Colorectal Cancer.

Project Source Document

Elisabetta Mereu, Atefeh Lafzi, Catia Moutinho, Christoph Ziegenhain, Davis J. MacCarthy, Adrian Alvarez, Eduard Batlle, Sagar, Dominic Grün, Julia K. Lau, Stéphane C. Boutet, Chad Sanada, Aik Ooi, Robert C. Jones, Kelly Kaihara, Chris Brampton, Yasha Talaga, Yohei Sasagawa, Kaori Tanaka, Tetsutaro Hayashi, Cornelius Fischer, Sascha Sauer, Timo Trefzer, Christian Conrad, Xian Adiconis, Lan T. Nguyen, Aviv Regev, Joshua Z. Levin, Swati Parekh, Aleksandar Janjic, Lucas E. Wange, Johannes W. Bagnoli, Wolfgang Enard, Marta Gut, Rickard Sandberg, Itoshi Nikaido, Ivo Gut, Oliver Stegle, Holger Heyn (2020). Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects. Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects.

Project Source Document

Christian H. Holland, Jovan Tanevski, Javier Perales-Patón, Jan Gleixner, Manu P. Kumar, Elisabetta Mereu, Brian A. Joughin, Oliver Stegle, Douglas A. Lauffenburger, Holger Heyn, Bence Szalai, Julio Saez-Rodriguez (2020). Robustness and applicability of functional genomics tools on scRNA-seq data. *Robustness and applicability of functional genomics tools on scRNA-seq data.

Source Document

Julio Castaño, Sergi Aranda, Clara Bueno, Fernando J. Calero-Nieto, Eva Mejia-Ramirez, Luis Mosquera, Enrique Blanco, Xiaonan Wang, Cristina Prieto, Lorea Zabaleta, Elisabetta Mereu, Meritxell Rovira, Senda Jiménez-Delgado, Daniel R.Matson, Holger Heyn, Emery H. Bresnick, Berthold Göttgens, Luciano Di Croce, Alessandra Giorgetti (2019). GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm. *GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm.

Source Document

Elisabetta Mereu, Giovanni Iacono, Amy Guillaumet-Adkins, Catia Moutinho, Giulia Lunazzi, Catarina Santos, Irene Miguel-Escalada, Jorge Ferrer, Francisco X Real, Ivo Gut, Holger Heyn (2018). matchSCore: Matching Single-Cell Phenotypes Across Tools and Experiments. *matchSCore: Matching Single-Cell Phenotypes Across Tools and Experiments.

Preprint

Giovanni Iacono, Elisabetta Mereu, Amy Guillaumet-Adkins, Roser Corominas, Ivon Cuscó, Gustavo Rodríguez-Esteban, Marta Gut, Luis Alberto Pérez-Jurado, Ivo Gut, Holger Heyn (2018). bigSCale: An Analytical Framework for Big-Scale Single-Cell Data. *bigSCale: An Analytical Framework for Big-Scale Single-Cell Data.

Source Document

Martinez-Marti A, Felip E, Matito J, Mereu E, Navarro A, Cedrés S, Pardo N, Martinez de Castro A, Remon J, Miquel JM, Guillaumet-Adkins A, Nadal E, Rodriguez-Esteban G, Arqués O, Fasani R, Nuciforo P, Heyn H, Villanueva A, Palmer HG, Vivancos A (2017). Dual MET and ERBB inhibition overcomes intratumor plasticity in osimertinib-resistant-advanced non-small-cell lung cancer (NSCLC).. *Dual MET and ERBB inhibition overcomes intratumor plasticity in osimertinib-resistant-advanced non-small-cell lung cancer (NSCLC)..

Source Document

Amy Guillaumet-Adkins, Gustavo Rodríguez-Esteban, Elisabetta Mereu, Maria Mendez-Lago, Diego A. Jaitin, Alberto Villanueva, August Vidal, Alex Martinez-Marti, Enriqueta Felip, Ana Vivancos, Hadas Keren-Shaul, Simon Heath, Marta Gut, Ido Amit, Ivo Gut, Holger Heyn (2017). Single-cell transcriptome conservation in cryopreserved cells and tissues. *Single-cell transcriptome conservation in cryopreserved cells and tissues.

Source Document